Sequence Similarity Clusters for the Entities in PDB 1JDP

Entity #1 | Chains: A,B
ATRIAL NATRIURETIC PEPTIDE CLEARANCE RECEPTOR protein, length: 441 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24617
95 % 1 4 9769 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.2
PDBFlex
90 % 1 4 9655
70 % 1 4 9179
50 % 1 4 8325
40 % 1 4 7639
30 % 1 4 6747
Entity #2 | Chains: H
C-TYPE NATRIURETIC PEPTIDE protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72583
95 % 1 1 50668
90 % 1 1 48123
70 % 1 1 42283
50 % 1 1 36216
40 % 1 1 32000
30 % 1 1 27184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.