Sequence Similarity Clusters for the Entities in PDB 1JDO

Entity #1 | Chains: A
MYOGLOBIN protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 14 3942
95 % 181 267 116 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 181 267 119
70 % 249 372 73
50 % 249 374 97
40 % 259 384 117
30 % 427 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.