Sequence Similarity Clusters for the Entities in PDB 1JDO

Entity #1 | Chains: A
MYOGLOBIN protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 68 102 326
95 % 197 286 119 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 197 286 123
70 % 266 392 76
50 % 266 394 102
40 % 276 404 122
30 % 464 1294 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures