Sequence Similarity Clusters for the Entities in PDB 1JDM

Entity #1 | Chains: A
Sarcolipin protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59563
95 % 1 1 48669
90 % 1 1 46207
70 % 3 3 21873
50 % 3 3 18792
40 % 3 3 16600
30 % 3 3 13918

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures