Sequence Similarity Clusters for the Entities in PDB 1JDM

Entity #1 | Chains: A
Sarcolipin protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75808
95 % 1 1 52794
90 % 1 1 50043
70 % 3 3 22453
50 % 3 3 19427
40 % 3 3 17291
30 % 3 3 14838

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures