Sequence Similarity Clusters for the Entities in PDB 1JDI

Entity #1 | Chains: A,B,C,D,E,F
L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6085
95 % 2 2 6257 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 2 6251
70 % 2 2 6087
50 % 2 2 5704
40 % 2 2 5322
30 % 20 21 1854

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures