Sequence Similarity Clusters for the Entities in PDB 1JDI

Entity #1 | Chains: A,B,C,D,E,F
L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12785
95 % 2 2 5774 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 2 5786
70 % 2 2 5670
50 % 2 2 5345
40 % 2 2 5027
30 % 2 2 4544

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.