Sequence Similarity Clusters for the Entities in PDB 1JDH

Entity #1 | Chains: A
BETA-CATENIN protein, length: 529 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 24 1186
95 % 2 24 1603 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.4
PDBFlex
90 % 2 24 1640
70 % 2 25 1539
50 % 2 25 1580
40 % 2 25 1601
30 % 2 28 1367
Entity #2 | Chains: B
hTcf-4 protein, length: 38 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72300
95 % 1 1 50328
90 % 1 1 47803
70 % 1 1 42021
50 % 1 1 35932
40 % 1 1 31669
30 % 1 1 26815

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.