Sequence Similarity Clusters for the Entities in PDB 1JDF

Entity #1 | Chains: A,B,C,D
Glucarate Dehydratase protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16976
95 % 5 9 1781 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 9 1822
70 % 6 11 1528
50 % 13 22 659
40 % 13 22 685
30 % 143 234 25

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.