Sequence Similarity Clusters for the Entities in PDB 1JDF

Entity #1 | Chains: A,B,C,D
Glucarate Dehydratase protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17839
95 % 5 9 1866 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 9 1908
70 % 6 11 1605
50 % 13 22 708
40 % 13 22 737
30 % 143 238 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures