Sequence Similarity Clusters for the Entities in PDB 1JDE

Entity #1 | Chains: A
PYRUVATE, PHOSPHATE DIKINASE protein, length: 873 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49898
95 % 6 7 10065 Flexibility: Medium
Max RMSD: 11.8, Avg RMSD: 4.4
PDBFlex
90 % 6 7 9944
70 % 6 7 9437
50 % 9 14 3159
40 % 9 14 3082
30 % 9 14 2890

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.