Sequence Similarity Clusters for the Entities in PDB 1JDD

Entity #1 | Chains: A
1,4-ALPHA MALTOTETRAHYDROLASE protein, length: 429 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 14549
95 % 2 8 9421 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 8 9309
70 % 2 8 8895
50 % 2 8 8122
40 % 2 8 7425
30 % 4 21 2184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures