Sequence Similarity Clusters for the Entities in PDB 1JDB

Entity #1 | Chains: B,E,H,K
CARBAMOYL PHOSPHATE SYNTHETASE protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 1359
95 % 5 10 1203
90 % 5 10 1227
70 % 5 10 1264
50 % 5 10 1310
40 % 5 10 1328
30 % 5 10 1307
Entity #2 | Chains: C,F,I,L
CARBAMOYL PHOSPHATE SYNTHETASE protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 4316
95 % 5 10 1220
90 % 5 10 1244
70 % 5 10 1279
50 % 5 10 1327
40 % 5 10 1347
30 % 5 10 1323

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.