Sequence Similarity Clusters for the Entities in PDB 1JDB

Entity #1 | Chains: B,E,H,K
CARBAMOYL PHOSPHATE SYNTHETASE protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 1335
95 % 5 10 1194
90 % 5 10 1218
70 % 5 10 1256
50 % 5 10 1301
40 % 5 10 1316
30 % 5 10 1295
Entity #2 | Chains: C,F,I,L
CARBAMOYL PHOSPHATE SYNTHETASE protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 4288
95 % 5 10 1211
90 % 5 10 1235
70 % 5 10 1270
50 % 5 10 1319
40 % 5 10 1337
30 % 5 10 1313

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.