Sequence Similarity Clusters for the Entities in PDB 1JD7

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 453 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51178
95 % 7 9 7356 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 7 9 7316
70 % 7 9 7105
50 % 7 9 6548
40 % 75 90 557
30 % 75 90 561

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.