Sequence Similarity Clusters for the Entities in PDB 1JD7

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 453 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52451
95 % 7 9 7563 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 7 9 7514
70 % 7 9 7320
50 % 7 9 6738
40 % 76 91 564
30 % 76 91 561

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.