Sequence Similarity Clusters for the Entities in PDB 1JD6

Entity #1 | Chains: A
APOPTOSIS 1 INHIBITOR protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 4062
95 % 3 4 4844 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.9
PDBFlex
90 % 3 4 4860
70 % 3 4 4754
50 % 3 4 4568
40 % 3 4 4342
30 % 3 4 3989
Entity #2 | Chains: B
head involution defective protein protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.