Sequence Similarity Clusters for the Entities in PDB 1JD5

Entity #1 | Chains: A
APOPTOSIS 1 INHIBITOR protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4922
95 % 1 4 5245 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 1 4 5270
70 % 1 4 5135
50 % 1 4 4898
40 % 1 4 4612
30 % 1 4 4147
Entity #2 | Chains: B
cell death protein GRIM protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1JD5 1 A APOPTOSIS 1 INHIBITOR 7227 2.3.2.27 | Details
2 1Q4Q 1 A, B, C, D, E, F, G, H, I, J Apoptosis 1 inhibitor DIAP1 BIR2 domain, residues 201-324 7227 2.3.2.27 | Details
3 1JD6 1 A APOPTOSIS 1 INHIBITOR 7227 2.3.2.27 | Details
4 1JD4 1 A, B APOPTOSIS 1 INHIBITOR 7227 2.3.2.27 | Details