Sequence Similarity Clusters for the Entities in PDB 1JD5

Entity #1 | Chains: A
APOPTOSIS 1 INHIBITOR protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4888
95 % 1 4 5204 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 1 4 5233
70 % 1 4 5097
50 % 1 4 4863
40 % 1 4 4575
30 % 1 4 4119
Entity #2 | Chains: B
cell death protein GRIM protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures