Sequence Similarity Clusters for the Entities in PDB 1JD5

Entity #1 | Chains: A
APOPTOSIS 1 INHIBITOR protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 5147
95 % 1 4 5461 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 1 4 5472
70 % 1 4 5314
50 % 1 4 5041
40 % 1 4 4740
30 % 1 4 4259
Entity #2 | Chains: B
cell death protein GRIM protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures