Sequence Similarity Clusters for the Entities in PDB 1JD5

Entity #1 | Chains: A
APOPTOSIS 1 INHIBITOR protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 3999
95 % 1 4 4772 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 1 4 4785
70 % 1 4 4695
50 % 1 4 4510
40 % 1 4 4283
30 % 1 4 3930
Entity #2 | Chains: B
cell death protein GRIM protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.