Sequence Similarity Clusters for the Entities in PDB 1JD4

Entity #1 | Chains: A,B
APOPTOSIS 1 INHIBITOR protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3978
95 % 4 4 4750 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 4 4 4764
70 % 4 4 4677
50 % 4 4 4494
40 % 4 4 4270
30 % 4 4 3919

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.