Sequence Similarity Clusters for the Entities in PDB 1JD1

Entity #1 | Chains: A,B,C,D,E,F
HYPOTHETICAL 13.9 KDA PROTEIN IN FCY2-PET117 INTERGENIC REGION protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13593
95 % 1 1 12948 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 12732
70 % 1 1 11995
50 % 1 1 10694
40 % 13 31 457
30 % 13 36 308

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.