Sequence Similarity Clusters for the Entities in PDB 1JCS

Entity #1 | Chains: A
PROTEIN FARNESYLTRANSFERASE, ALPHA SUBUNIT protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 34 323
95 % 8 42 389
90 % 19 56 358
70 % 19 56 395
50 % 19 56 466
40 % 19 56 505
30 % 19 56 505
Entity #2 | Chains: B
PROTEIN FARNESYLTRANSFERASE, BETA SUBUNIT protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 41 892
95 % 19 56 856
90 % 19 56 890
70 % 19 56 920
50 % 19 56 973
40 % 19 56 992
30 % 19 56 970
Entity #3 | Chains: C
SYNTHETIC HEXAPEPTIDE TKCVFM protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.