Sequence Similarity Clusters for the Entities in PDB 1JCR

Entity #1 | Chains: A
PROTEIN FARNESYLTRANSFERASE, ALPHA SUBUNIT protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 34 279
95 % 1 42 362
90 % 9 56 339
70 % 9 56 370
50 % 9 56 434
40 % 9 56 468
30 % 9 56 470
Entity #2 | Chains: B
PROTEIN FARNESYLTRANSFERASE, BETA SUBUNIT protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 41 842
95 % 9 56 791
90 % 9 56 826
70 % 9 56 868
50 % 9 56 916
40 % 9 56 937
30 % 9 56 929
Entity #3 | Chains: C
SYNTHETIC TETRAPEPTIDE CVFM protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.