Sequence Similarity Clusters for the Entities in PDB 1JCQ

Entity #1 | Chains: A
PROTEIN FARNESYLTRANSFERASE, ALPHA SUBUNIT protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 14 3562
95 % 12 14 4288
90 % 27 56 347
70 % 27 56 385
50 % 27 56 456
40 % 27 56 491
30 % 27 56 490
Entity #2 | Chains: B
PROTEIN FARNESYLTRANSFERASE, BETA SUBUNIT protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 11 5137
95 % 28 56 820
90 % 28 56 853
70 % 28 56 888
50 % 28 56 938
40 % 28 56 961
30 % 28 56 948

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.