Sequence Similarity Clusters for the Entities in PDB 1JCQ

Entity #1 | Chains: A
PROTEIN FARNESYLTRANSFERASE, ALPHA SUBUNIT protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 14 3645
95 % 12 14 4399
90 % 27 56 358
70 % 27 56 395
50 % 27 56 466
40 % 27 56 505
30 % 27 56 505
Entity #2 | Chains: B
PROTEIN FARNESYLTRANSFERASE, BETA SUBUNIT protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 11 5297
95 % 28 56 856
90 % 28 56 890
70 % 28 56 920
50 % 28 56 973
40 % 28 56 992
30 % 28 56 970

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.