Sequence Similarity Clusters for the Entities in PDB 1JCK

Entity #1 | Chains: A,C
14.3.D T CELL ANTIGEN RECEPTOR protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 7133
95 % 10 11 3090 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.6
PDBFlex
90 % 15 16 1915
70 % 289 302 41
50 % 292 305 77
40 % 292 305 93
30 % 4966 5461 1
Entity #2 | Chains: B,D
STAPHYLOCOCCAL ENTEROTOXIN C3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27098
95 % 29 29 1355 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.1
PDBFlex
90 % 29 29 1378
70 % 29 29 1396
50 % 54 56 492
40 % 57 59 482
30 % 85 88 322

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.