Sequence Similarity Clusters for the Entities in PDB 1JCK

Entity #1 | Chains: A,C
14.3.D T CELL ANTIGEN RECEPTOR protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 7316
95 % 10 11 3173
90 % 20 21 1492
70 % 301 314 28
50 % 304 317 73
40 % 304 317 94
30 % 5186 5705 1
Entity #2 | Chains: B,D
STAPHYLOCOCCAL ENTEROTOXIN C3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27701
95 % 29 29 1382
90 % 29 29 1407
70 % 29 29 1425
50 % 55 57 500
40 % 58 60 487
30 % 86 89 332

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures