Sequence Similarity Clusters for the Entities in PDB 1JCH

Entity #1 | Chains: A,C
COLICIN E3 protein, length: 551 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31081
95 % 2 2 15366
90 % 2 2 15073
70 % 2 2 14136
50 % 2 2 12550
40 % 2 2 11373
30 % 2 2 9878
Entity #2 | Chains: B,D
COLICIN E3 IMMUNITY PROTEIN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 9706
95 % 5 5 9783
90 % 5 5 9674
70 % 5 5 9213
50 % 5 5 8334
40 % 5 5 7632
30 % 5 5 6731

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.