Sequence Similarity Clusters for the Entities in PDB 1JCH

Entity #1 | Chains: A,C
COLICIN E3 protein, length: 551 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29592
95 % 2 2 14591
90 % 2 2 14318
70 % 2 2 13434
50 % 2 2 11981
40 % 2 2 10858
30 % 2 2 9439
Entity #2 | Chains: B,D
COLICIN E3 IMMUNITY PROTEIN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 9237
95 % 5 5 9292
90 % 5 5 9188
70 % 5 5 8748
50 % 5 5 7942
40 % 5 5 7282
30 % 5 5 6425

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.