Sequence Similarity Clusters for the Entities in PDB 1JCF

Entity #1 | Chains: A
ROD SHAPE-DETERMINING PROTEIN MREB protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15105
95 % 1 4 14253 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 1 4 14029
70 % 1 4 13200
50 % 8 13 3933
40 % 8 13 3768
30 % 8 13 3513

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures