Sequence Similarity Clusters for the Entities in PDB 1JCF

Entity #1 | Chains: A
ROD SHAPE-DETERMINING PROTEIN MREB protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 14339
95 % 1 4 13565 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 1 4 13348
70 % 1 4 12546
50 % 8 13 3763
40 % 8 13 3604
30 % 8 13 3363

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.