Sequence Similarity Clusters for the Entities in PDB 1JCF

Entity #1 | Chains: A
ROD SHAPE-DETERMINING PROTEIN MREB protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15378
95 % 1 4 14485 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 1 4 14255
70 % 1 4 13396
50 % 8 13 3996
40 % 8 13 3820
30 % 8 13 3563

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures