Sequence Similarity Clusters for the Entities in PDB 1JCE

Entity #1 | Chains: A
ROD SHAPE-DETERMINING PROTEIN MREB protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 15953
95 % 2 4 14850 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 2 4 14543
70 % 2 4 13617
50 % 9 13 4043
40 % 9 13 3770
30 % 9 13 3494

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures