Sequence Similarity Clusters for the Entities in PDB 1JC1

Entity #1 | Chains: A,B,C
GREEN FLUORESCENT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12914
95 % 190 251 65 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 201 291 36
70 % 205 296 29
50 % 205 297 76
40 % 213 310 82
30 % 349 521 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures