Sequence Similarity Clusters for the Entities in PDB 1JBY

Entity #1 | Chains: A
GREEN FLUORESCENT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 11198
95 % 167 254 68 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 175 294 37
70 % 179 300 33
50 % 179 302 79
40 % 183 315 96
30 % 269 530 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2DUH 1 A Green fluorescent protein 6100
2 2DUE 1 A Green fluorescent protein 6100
3 2DUI 1 A Green fluorescent protein 6100
4 2DUG 1 A Green fluorescent protein 6100
5 2DUF 1 A Green fluorescent protein 6100
6 1JBZ 1 A GREEN FLUORESCENT PROTEIN 6100
7 1JBY 1 A GREEN FLUORESCENT PROTEIN 6100