Sequence Similarity Clusters for the Entities in PDB 1JBY

Entity #1 | Chains: A
GREEN FLUORESCENT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 11771
95 % 173 265 67 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 183 307 23
70 % 185 311 30
50 % 185 313 78
40 % 189 326 90
30 % 279 546 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2DUH 1 A Green fluorescent protein 6100
2 2DUE 1 A Green fluorescent protein 6100
3 2DUI 1 A Green fluorescent protein 6100
4 2DUG 1 A Green fluorescent protein 6100
5 2DUF 1 A Green fluorescent protein 6100
6 1JBZ 1 A GREEN FLUORESCENT PROTEIN 6100
7 1JBY 1 A GREEN FLUORESCENT PROTEIN 6100