Sequence Similarity Clusters for the Entities in PDB 1JBU

Entity #1 | Chains: H
COAGULATION FACTOR VII protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 57 97 274
95 % 58 101 365 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 0.7
PDBFlex
90 % 58 101 388
70 % 58 101 425
50 % 58 101 506
40 % 1154 1695 4
30 % 1242 1845 6
Entity #2 | Chains: L
COAGULATION FACTOR VII protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 34 1215
95 % 31 34 1635 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 31 34 1672
70 % 31 34 1692
50 % 31 34 1725
40 % 31 34 1726
30 % 31 34 1687
Entity #3 | Chains: X
Peptide exosite inhibitor A-183 protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.