Sequence Similarity Clusters for the Entities in PDB 1JBU

Entity #1 | Chains: H
COAGULATION FACTOR VII protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 57 97 332
95 % 58 101 396 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 0.7
PDBFlex
90 % 58 101 428
70 % 58 101 460
50 % 58 101 520
40 % 1252 1855 4
30 % 1259 1869 7
Entity #2 | Chains: L
COAGULATION FACTOR VII protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 34 1376
95 % 31 34 1621 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 31 34 1656
70 % 31 34 1674
50 % 31 34 1706
40 % 31 34 1695
30 % 97 152 363
Entity #3 | Chains: X
Peptide exosite inhibitor A-183 protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures