Sequence Similarity Clusters for the Entities in PDB 1JBT

Entity #1 | Chains: C,D
29-MER SARCIN/RICIN DOMAIN RNA ANALOG rna, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
RESTRICTOCIN protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13401
95 % 4 4 9548 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 4 4 9448
70 % 4 6 6943
50 % 4 6 6403
40 % 4 6 5966
30 % 4 6 5343

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.