Sequence Similarity Clusters for the Entities in PDB 1JBO

Entity #1 | Chains: A
C-Phycocyanin alpha chain protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 21145
95 % 2 13 4852
90 % 2 13 4869
70 % 2 30 372
50 % 2 36 388
40 % 2 45 283
30 % 6 120 122
Entity #2 | Chains: B
C-Phycocyanin beta chain protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 13 4081
95 % 2 13 4846
90 % 2 13 4863
70 % 2 33 371
50 % 5 53 235
40 % 5 73 197
30 % 7 120 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.