Sequence Similarity Clusters for the Entities in PDB 1JBM

Entity #1 | Chains: A,B,C,D,E,F,G
PUTATIVE SNRNP SM-LIKE PROTEIN protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 1395
95 % 2 5 1109 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 2 5 1137
70 % 2 5 1176
50 % 2 5 1223
40 % 2 5 1217
30 % 2 7 1176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures