Sequence Similarity Clusters for the Entities in PDB 1JBG

Entity #1 | Chains: A
transcription activator of multidrug-efflux transporter genes mta protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30486
95 % 2 2 25226 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 24377
70 % 2 2 22137
50 % 2 2 19128
40 % 2 3 14491
30 % 2 3 12389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures