Sequence Similarity Clusters for the Entities in PDB 1JBG

Entity #1 | Chains: A
transcription activator of multidrug-efflux transporter genes mta protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29843
95 % 2 2 24723 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 23907
70 % 2 2 21734
50 % 2 2 18808
40 % 2 3 14240
30 % 2 3 12185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures