Sequence Similarity Clusters for the Entities in PDB 1JBD

Entity #1 | Chains: A
LONG NEUROTOXIN 1 protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 20 2978
95 % 14 26 1877
90 % 15 27 1776
70 % 15 27 1785
50 % 23 39 1178
40 % 82 126 325
30 % 89 134 302
Entity #2 | Chains: B
MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures