Sequence Similarity Clusters for the Entities in PDB 1JBB

Entity #1 | Chains: A,B
ubiquitin conjugating enzyme E2-17.5 KDA protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 22343
95 % 3 5 12752 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 3 5 12541
70 % 10 27 904
50 % 31 88 304
40 % 59 176 166
30 % 59 184 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.