Sequence Similarity Clusters for the Entities in PDB 1JBB

Entity #1 | Chains: A,B
ubiquitin conjugating enzyme E2-17.5 KDA protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 21999
95 % 3 5 12569 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.1
PDBFlex
90 % 3 5 12361
70 % 10 27 894
50 % 31 88 297
40 % 58 175 169
30 % 58 183 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.