Sequence Similarity Clusters for the Entities in PDB 1JB6

Entity #1 | Chains: A,B
HEPATOCYTE NUCLEAR FACTOR 1-ALPHA protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50211
95 % 4 5 4378
90 % 5 6 3795
70 % 5 6 3739
50 % 5 6 3631
40 % 5 6 3497
30 % 5 6 3265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures