Sequence Similarity Clusters for the Entities in PDB 1JB4

Entity #1 | Chains: A,B
NUCLEAR TRANSPORT FACTOR 2 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47024
95 % 4 12 2389 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 4 12 2456
70 % 4 12 2460
50 % 4 12 2439
40 % 7 15 1685
30 % 11 25 1135

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures