Sequence Similarity Clusters for the Entities in PDB 1JB2

Entity #1 | Chains: A,B
NUCLEAR TRANSPORT FACTOR 2 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47082
95 % 2 12 2390 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 2 12 2457
70 % 2 12 2462
50 % 2 12 2440
40 % 5 15 1688
30 % 9 25 1136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures