Sequence Similarity Clusters for the Entities in PDB 1JAK

Entity #1 | Chains: A
Beta-N-acetylhexosaminidase protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 8501
95 % 1 8 8547 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 11 5542
70 % 1 11 5420
50 % 1 11 5163
40 % 6 20 2891
30 % 6 21 2555

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures