Sequence Similarity Clusters for the Entities in PDB 1JAK

Entity #1 | Chains: A
Beta-N-acetylhexosaminidase protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 11259
95 % 1 8 8291 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 11 5006
70 % 1 11 4899
50 % 1 11 4691
40 % 6 20 2683
30 % 6 21 2430

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.