Sequence Similarity Clusters for the Entities in PDB 1JAE

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 471 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 17489
95 % 1 4 16146 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 4 15814
70 % 1 4 14774
50 % 16 83 602
40 % 16 92 589
30 % 16 92 588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures