Sequence Similarity Clusters for the Entities in PDB 1JAE

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 471 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25562
95 % 1 4 15930 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 4 15632
70 % 1 4 14641
50 % 16 82 596
40 % 16 91 565
30 % 16 91 562

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures