Sequence Similarity Clusters for the Entities in PDB 1JAE

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 471 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 18048
95 % 1 4 16655 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 4 16302
70 % 1 4 15209
50 % 16 83 626
40 % 16 92 604
30 % 16 92 598

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures