Sequence Similarity Clusters for the Entities in PDB 1JAC

Entity #1 | Chains: A,C,E,G
JACALIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 427
95 % 24 31 336
90 % 25 32 348
70 % 28 36 347
50 % 33 46 270
40 % 33 46 292
30 % 62 87 199
Entity #2 | Chains: B,D,F,H
JACALIN protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23652
95 % 1 1 20187
90 % 8 14 952
70 % 8 14 979
50 % 8 14 1024
40 % 8 14 1036
30 % 8 14 1014

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.