Sequence Similarity Clusters for the Entities in PDB 1JAC

Entity #1 | Chains: A,C,E,G
JACALIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 16 615
95 % 19 26 404
90 % 20 27 407
70 % 23 31 393
50 % 28 41 294
40 % 28 41 312
30 % 57 82 203
Entity #2 | Chains: B,D,F,H
JACALIN protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22723
95 % 1 1 19405
90 % 8 14 894
70 % 8 14 930
50 % 8 14 977
40 % 8 14 991
30 % 8 14 981

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.