Sequence Similarity Clusters for the Entities in PDB 1JAB

Entity #1 | Chains: A
PROTEIN (ANTIFREEZE PROTEIN TYPE III) protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 74585
95 % 7 33 1768 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 7 33 1809
70 % 8 36 1628
50 % 9 38 1526
40 % 9 38 1526
30 % 9 38 1504

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures