Sequence Similarity Clusters for the Entities in PDB 1JA3

Entity #1 | Chains: A,B
MHC class I recognition receptor Ly49I protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43992
95 % 5 5 10336 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.8
PDBFlex
90 % 5 5 10196
70 % 5 5 9671
50 % 8 8 4715
40 % 8 8 4477
30 % 206 217 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.