Sequence Similarity Clusters for the Entities in PDB 1JA3

Entity #1 | Chains: A,B
MHC class I recognition receptor Ly49I protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45732
95 % 5 5 10775 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.5
PDBFlex
90 % 5 5 10625
70 % 5 5 10090
50 % 8 8 4926
40 % 8 8 4669
30 % 209 220 101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures