Sequence Similarity Clusters for the Entities in PDB 1JA3

Entity #1 | Chains: A,B
MHC class I recognition receptor Ly49I protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44101
95 % 5 5 11269 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.5
PDBFlex
90 % 5 5 11119
70 % 5 5 10499
50 % 8 8 5089
40 % 8 8 4773
30 % 280 291 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures