Sequence Similarity Clusters for the Entities in PDB 1J9M

Entity #1 | Chains: A
DD-transpeptidase protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59537
95 % 3 7 10780 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 7 10651
70 % 3 7 10128
50 % 3 7 9176
40 % 3 7 8394
30 % 3 7 7394

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures