Sequence Similarity Clusters for the Entities in PDB 1J9M

Entity #1 | Chains: A
DD-transpeptidase protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58452
95 % 3 7 10531 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 7 10403
70 % 3 7 9900
50 % 3 7 8978
40 % 3 7 8214
30 % 3 7 7241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures