Sequence Similarity Clusters for the Entities in PDB 1J9K

Entity #1 | Chains: A,B
STATIONARY PHASE SURVIVAL PROTEIN protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9066
95 % 3 4 9310 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 4 9217
70 % 3 4 8835
50 % 3 4 8014
40 % 13 29 611
30 % 14 30 590

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures