Sequence Similarity Clusters for the Entities in PDB 1J9K

Entity #1 | Chains: A,B
STATIONARY PHASE SURVIVAL PROTEIN protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 8910
95 % 3 4 9186 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 4 9093
70 % 3 4 8717
50 % 3 4 7900
40 % 13 29 604
30 % 14 30 581

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.