Sequence Similarity Clusters for the Entities in PDB 1J9C

Entity #1 | Chains: T
Tissue factor protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 37 39 932
95 % 38 40 1228 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.0
PDBFlex
90 % 38 40 1258
70 % 39 41 1231
50 % 39 41 1285
40 % 39 41 1300
30 % 39 41 1276
Entity #2 | Chains: L
factor VIIa light chain protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 13817
95 % 4 5 13135 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 4 5 12921
70 % 4 5 12167
50 % 4 5 10849
40 % 29 31 1469
30 % 29 31 1445
Entity #3 | Chains: H
factor VIIa heavy chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 96 97 270
95 % 100 101 361
90 % 100 101 385
70 % 100 101 422
50 % 100 101 502
40 % 1618 1685 4
30 % 1754 1834 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.