Sequence Similarity Clusters for the Entities in PDB 1J95

Entity #1 | Chains: A,B,C,D
VOLTAGE-GATED POTASSIUM CHANNEL protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 20 2253
95 % 55 60 714 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.0
PDBFlex
90 % 55 60 739
70 % 32 35 1344
50 % 32 35 1372
40 % 32 35 1359
30 % 32 35 1350

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures