Sequence Similarity Clusters for the Entities in PDB 1J95

Entity #1 | Chains: A,B,C,D
VOLTAGE-GATED POTASSIUM CHANNEL protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 20 2205
95 % 55 60 697 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.9
PDBFlex
90 % 55 60 717
70 % 32 35 1320
50 % 32 35 1355
40 % 32 35 1340
30 % 32 35 1327

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures