Sequence Similarity Clusters for the Entities in PDB 1J8Y

Entity #1 | Chains: F
SIGNAL RECOGNITION 54 KDA PROTEIN protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38351
95 % 2 2 32489 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 31120
70 % 3 4 9072
50 % 3 4 8278
40 % 3 4 7563
30 % 29 54 644

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures