Sequence Similarity Clusters for the Entities in PDB 1J8V

Entity #1 | Chains: A
Beta-D-glucan glucohydrolase isoenzyme EXO1 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 4073
95 % 18 22 3006 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 18 22 3060
70 % 18 22 3009
50 % 18 22 2962
40 % 19 23 2755
30 % 19 23 2549

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures