Sequence Similarity Clusters for the Entities in PDB 1J8S

Entity #1 | Chains: A
PYELONEPHRITIC ADHESIN protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42471
95 % 7 8 5956 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 7 8 5962
70 % 7 8 5821
50 % 7 8 5472
40 % 7 8 5141
30 % 7 8 4635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures