Sequence Similarity Clusters for the Entities in PDB 1J8R

Entity #1 | Chains: A
PYELONEPHRITIC ADHESIN protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43363
95 % 6 8 6088 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 6 8 6099
70 % 6 8 5948
50 % 6 8 5582
40 % 6 8 5240
30 % 6 8 4731

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures