Sequence Similarity Clusters for the Entities in PDB 1J8Q

Entity #1 | Chains: A
FLAVODOXIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 10773
95 % 3 28 1822 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 3 28 1859
70 % 3 28 1889
50 % 4 29 1788
40 % 4 34 1068
30 % 5 60 691

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures