Sequence Similarity Clusters for the Entities in PDB 1J8M

Entity #1 | Chains: F
SIGNAL RECOGNITION 54 KDA PROTEIN protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56294
95 % 1 2 28738 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 27746
70 % 2 4 8497
50 % 2 4 7719
40 % 2 4 7111
30 % 23 51 661

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.