Sequence Similarity Clusters for the Entities in PDB 1J8F

Entity #1 | Chains: A,B,C
SIRTUIN 2, ISOFORM 1 protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 18 1277
95 % 12 23 1173 Flexibility: Low
Max RMSD: 9.5, Avg RMSD: 2.2
PDBFlex
90 % 12 23 1201
70 % 12 23 1233
50 % 15 51 521
40 % 20 64 479
30 % 37 116 247

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.